Copper in the structure of Crystal Structure of H2O2 Treated Cu,Zn-Sod (pdb 2zow)

The binding sites of Copper atom in the structure of Crystal Structure of H2O2 Treated Cu,Zn-Sod (pdb code 2zow). This binding sites where shown with 5.0 Angstroms radius around Copper atom. The 2zow structure was solved by S.ITO, T.ISHII, H.SAKAI, K.UCHIDA, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 27.9-1.4 Space group P212121 a (A) 45.631 b (A) 51.009 c (A) 146.990 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.6 Rfree (%) 22.1 Copper Binding Sites: Copper binding site 1 out of 2 in 2zow Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 2zow. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His44, A: His46, A: His61, A: Val116, A: His118, A: Hoh401, A: Hoh466, conact list: Atom Atom Distance (A) Cu O A:His44 4.49 Cu NE2 A:His44 4.12 Cu N A:His44 4.14 Cu CB A:His44 3.31 Cu ND1 A:His44 2.02 Cu CD2 A:His44 4.13 Cu C A:His44 4.62 Cu CE1 A:His44 3.01 Cu CG A:His44 3.00 Cu CA A:His44 4.24 Cu NE2 A:His46 1.98 Cu ND1 A:His46 4.07 Cu CD2 A:His46 3.01 Cu CE1 A:His46 2.96 Cu CG A:His46 4.14 Cu NE2 A:His61 3.24 Cu ND1 A:His61 4.85 Cu CD2 A:His61 3.58 Cu CE1 A:His61 4.15 Cu CG A:His61 4.59 Cu O A:Val116 4.41 Cu CB A:Val116 3.97 Cu CG2 A:Val116 4.80 Cu C A:Val116 4.93 Cu CG1 A:Val116 4.14 Cu NE2 A:His118 2.00 Cu ND1 A:His118 4.11 Cu CD2 A:His118 2.93 Cu CE1 A:His118 3.05 Cu CG A:His118 4.10 Cu O A:Hoh401 3.78 Cu O A:Hoh466 3.74 interactive model: Copper binding site 2 out of 2 in 2zow Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Copper in the PDB 2zow. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His44, B: His46, B: His61, B: Val116, B: His118, B: Hoh433, conact list: Atom Atom Distance (A) Cu O B:His44 4.47 Cu NE2 B:His44 4.11 Cu N B:His44 4.17 Cu CB B:His44 3.27 Cu ND1 B:His44 2.02 Cu CD2 B:His44 4.13 Cu C B:His44 4.61 Cu CE1 B:His44 3.01 Cu CG B:His44 2.98 Cu CA B:His44 4.22 Cu NE2 B:His46 2.00 Cu ND1 B:His46 4.08 Cu CD2 B:His46 3.00 Cu CE1 B:His46 2.98 Cu CG B:His46 4.14 Cu NE2 B:His61 3.20 Cu ND1 B:His61 4.88 Cu CD2 B:His61 3.56 Cu CE1 B:His61 4.15 Cu CG B:His61 4.62 Cu O B:Val116 4.44 Cu CB B:Val116 3.91 Cu CG2 B:Val116 4.66 Cu C B:Val116 4.89 Cu CG1 B:Val116 4.18 Cu CA B:Val116 5.00 Cu NE2 B:His118 2.05 Cu ND1 B:His118 4.19 Cu CD2 B:His118 2.95 Cu CE1 B:His118 3.13 Cu CG B:His118 4.13 Cu O B:Hoh433 3.53 interactive model: