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Copper in PDB 2wz0: L38V SOD1 Mutant Complexed with Aniline.

Enzymatic activity of L38V SOD1 Mutant Complexed with Aniline.

All present enzymatic activity of L38V SOD1 Mutant Complexed with Aniline.:
1.15.1.1;

Protein crystallography data

The structure of L38V SOD1 Mutant Complexed with Aniline., PDB code: 2wz0 was solved by S.Antonyuk, R.W.Strange, S.S.Hasnain, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.00 / 1.72
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.006, 68.261, 50.988, 90.00, 106.15, 90.00
R / Rfree (%) 19.4 / 26

Copper Binding Sites:

The binding sites of Copper atom in the L38V SOD1 Mutant Complexed with Aniline. (pdb code 2wz0). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the L38V SOD1 Mutant Complexed with Aniline., PDB code: 2wz0:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 2wz0

Go back to Copper Binding Sites List in 2wz0
Copper binding site 1 out of 2 in the L38V SOD1 Mutant Complexed with Aniline.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of L38V SOD1 Mutant Complexed with Aniline. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu154

b:19.2
occ:0.80
ZN A:ZN154A 1.3 25.9 0.2
ND1 A:HIS46 2.0 15.3 1.0
NE2 A:HIS48 2.0 12.6 1.0
NE2 A:HIS120 2.1 15.5 1.0
CD2 A:HIS48 3.0 11.6 1.0
CD2 A:HIS120 3.0 15.7 1.0
CG A:HIS46 3.0 15.7 1.0
CE1 A:HIS46 3.0 17.4 1.0
CE1 A:HIS48 3.1 14.4 1.0
CE1 A:HIS120 3.1 15.3 1.0
CB A:HIS46 3.2 13.8 1.0
NE2 A:HIS63 3.4 17.9 1.0
CD2 A:HIS63 3.8 18.9 1.0
O A:HOH2124 3.8 26.9 1.0
CB A:VAL118 4.0 12.3 1.0
CD2 A:HIS46 4.1 18.8 1.0
CG A:HIS48 4.1 11.0 1.0
CG A:HIS120 4.1 13.7 1.0
NE2 A:HIS46 4.1 18.7 1.0
ND1 A:HIS48 4.1 10.9 1.0
ND1 A:HIS120 4.2 15.2 1.0
CG1 A:VAL118 4.2 13.1 1.0
CA A:HIS46 4.2 12.7 1.0
N A:HIS46 4.2 10.6 1.0
CE1 A:HIS63 4.3 19.1 1.0
O A:HOH2139 4.3 28.7 1.0
O A:VAL118 4.5 13.6 1.0
O A:HIS46 4.5 11.5 1.0
C A:HIS46 4.6 11.9 1.0
CG2 A:VAL118 4.6 12.1 1.0
CG A:HIS63 4.7 17.3 1.0
C A:VAL118 4.9 13.6 1.0
ND1 A:HIS63 5.0 17.2 1.0

Copper binding site 2 out of 2 in 2wz0

Go back to Copper Binding Sites List in 2wz0
Copper binding site 2 out of 2 in the L38V SOD1 Mutant Complexed with Aniline.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of L38V SOD1 Mutant Complexed with Aniline. within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cu154

b:22.8
occ:1.00
NE2 F:HIS48 2.0 11.6 1.0
NE2 F:HIS120 2.0 14.8 1.0
ND1 F:HIS46 2.1 16.9 1.0
CD2 F:HIS120 2.9 15.1 1.0
CE1 F:HIS48 3.0 11.4 1.0
CD2 F:HIS48 3.0 12.8 1.0
CG F:HIS46 3.1 16.8 1.0
CE1 F:HIS120 3.1 18.2 1.0
CE1 F:HIS46 3.1 15.0 1.0
CB F:HIS46 3.3 13.8 1.0
NE2 F:HIS63 3.4 15.7 1.0
CD2 F:HIS63 3.7 16.8 1.0
O F:HOH2148 3.7 27.8 1.0
O F:HOH2072 4.0 29.0 1.0
CB F:VAL118 4.0 13.0 1.0
CG F:HIS120 4.1 14.9 1.0
ND1 F:HIS48 4.1 10.1 1.0
CG F:HIS48 4.1 9.6 1.0
ND1 F:HIS120 4.1 14.5 1.0
CG1 F:VAL118 4.2 11.8 1.0
NE2 F:HIS46 4.2 17.0 1.0
CD2 F:HIS46 4.2 16.7 1.0
CE1 F:HIS63 4.2 18.5 1.0
N F:HIS46 4.3 12.0 1.0
CA F:HIS46 4.3 12.4 1.0
O F:VAL118 4.5 11.9 1.0
O F:HIS46 4.6 11.3 1.0
CG F:HIS63 4.7 16.2 1.0
C F:HIS46 4.7 12.0 1.0
CG2 F:VAL118 4.8 10.2 1.0
ND1 F:HIS63 4.9 18.1 1.0
C F:VAL118 5.0 12.6 1.0

Reference:

S.Antonyuk, R.W.Strange, S.S.Hasnain. Structural Discovery of Small Molecule Binding Sites in Cu-Zn Human Superoxide Dismutase Familial Amyotrophic Lateral Sclerosis Mutants Provides Insights For Lead Optimization. J.Med.Chem. V. 53 1402 2010.
ISSN: ISSN 0022-2623
PubMed: 20067275
DOI: 10.1021/JM9017948
Page generated: Thu Sep 3 16:53:24 2020
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