Chemical elements
  Copper
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    Cuprous Compounds
    Complex Copper Compounds
    Cupric Compounds
    PDB 1a2v-1bxu
    PDB 1bxv-1fwx
    PDB 1g3d-1j9t
    PDB 1jcv-1mfm
    PDB 1mg2-1paz
    PDB 1pcs-1sii
    PDB 1sjm-1w6w
    PDB 1w77-2afn
    PDB 2ahk-2dv6
    PDB 2dws-2ggp
    PDB 2ghz-2mta
    PDB 2nrd-2vm3
    PDB 2vm4-2yah
      2vm4
      2vn3
      2vov
      2vox
      2vr6
      2vr7
      2vr8
      2vw4
      2vw6
      2vw7
      2vz3
      2w0q
      2w88
      2w8c
      2wko
      2wo0
      2wof
      2woh
      2wq8
      2wsd
      2wtp
      2wyt
      2wyz
      2wz0
      2wz5
      2wz6
      2x87
      2x88
      2xjh
      2xji
      2xjk
      2xjn
      2xl7
      2xla
      2xlg
      2xmj
      2xmk
      2xmm
      2xmt
      2xmu
      2xmv
      2xmw
      2xv0
      2xv2
      2xv3
      2y1a
      2y69
      2yae
      2yaf
      2yah
    PDB 2yam-3bkt
    PDB 3bqv-3fyi
    PDB 3g5w-3mie
    PDB 3mif-3t6v
    PDB 3t6w-9pcy

Copper in the structure of Crystal Structure Of G85R Als Mutant of Human Cu,Zn Superoxide Dismutase (Cuznsod) At 1.58 A Resolution (pdb 2vr7)






The binding sites of Copper atom in the structure of Crystal Structure Of G85R Als Mutant of Human Cu,Zn Superoxide Dismutase (Cuznsod) At 1.58 A Resolution (pdb code 2vr7). This binding sites where shown with 5.0 Angstroms radius around Copper atom.
The 2vr7 structure was solved by S.ANTONYUK, X.CAO, S.V.SEETHARAMAN, L.J.WHITSON, A.B.TAYLOR, S.P.HOLLOWAY, R.W.STRANGE, P.A.DOUCETTE, A.TIWARI, L.J.HAYWARD, S.PADUA, J.A.COHLBERG, J.SELVERSTONE VALENTINE, S.S.HASNAIN, P.J.HART, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-1.6
Space groupP1211
a (A)36.768
b (A)56.435
c (A)75.028
alpha (°)90.00
beta (°)102.98
gamma (°)90.00
Rfactor (%)13.5
Rfree (%)17.5


Copper Binding Sites:

Copper binding site 1 out of 2 in 2vr7


Copper binding site 1 out of 2 in 2vr7
Click to enlarge
stereopicture of Copper binding site 1 out of 2 in 2vr7
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 2vr7. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His46, A: His48, A: His63, A: Val118, A: His120, A: Zn1156, A: So41158,

conact list:


AtomAtomDistance (A)
CuO A:His464.68
CuNE2 A:His463.86
CuN A:His464.21
CuCB A:His462.73
CuND1 A:His461.73
CuCD2 A:His463.72
CuC A:His464.65
CuCE1 A:His462.88
CuCG A:His462.51
CuCA A:His464.02
CuNE2 A:His482.21
CuND1 A:His484.34
CuCD2 A:His483.03
CuCE1 A:His483.29
CuCG A:His484.24
CuNE2 A:His633.69
CuCD2 A:His634.08
CuCE1 A:His634.55
CuO A:Val1184.50
CuCB A:Val1184.05
CuCG2 A:Val1184.74
CuCG1 A:Val1184.19
CuNE2 A:His1202.12
CuND1 A:His1204.24
CuCD2 A:His1202.82
CuCE1 A:His1203.27
CuCG A:His1204.05
CuZN A:Zn11561.10
CuS A:So411584.32
CuO1 A:So411583.08
CuO2 A:So411584.59

interactive model:


Copper binding site 2 out of 2 in 2vr7


Copper binding site 2 out of 2 in 2vr7
Click to enlarge
stereopicture of Copper binding site 2 out of 2 in 2vr7
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Copper in the PDB 2vr7. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: F: His46, F: His48, F: His63, F: Val118, F: His120, F: Zn1156, F: So41158,

conact list:


AtomAtomDistance (A)
CuO F:His464.74
CuNE2 F:His463.95
CuN F:His464.28
CuCB F:His462.79
CuND1 F:His461.81
CuCD2 F:His463.81
CuC F:His464.71
CuCE1 F:His462.96
CuCG F:His462.60
CuCA F:His464.08
CuNE2 F:His482.10
CuND1 F:His484.22
CuCD2 F:His482.95
CuCE1 F:His483.18
CuCG F:His484.15
CuNE2 F:His633.76
CuCD2 F:His634.12
CuCE1 F:His634.63
CuO F:Val1184.62
CuCB F:Val1184.02
CuCG2 F:Val1184.72
CuCG1 F:Val1184.16
CuNE2 F:His1202.11
CuND1 F:His1204.23
CuCD2 F:His1202.88
CuCE1 F:His1203.23
CuCG F:His1204.10
CuZN F:Zn11560.99
CuS F:So411584.17
CuO1 F:So411582.96
CuO2 F:So411584.40

interactive model:




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