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Copper in PDB 2vb2: Crystal Structure of Cu(I)Cusf

Protein crystallography data

The structure of Crystal Structure of Cu(I)Cusf, PDB code: 2vb2 was solved by Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.28 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.468, 41.264, 44.573, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 26.3

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Cu(I)Cusf (pdb code 2vb2). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Crystal Structure of Cu(I)Cusf, PDB code: 2vb2:

Copper binding site 1 out of 1 in 2vb2

Go back to Copper Binding Sites List in 2vb2
Copper binding site 1 out of 1 in the Crystal Structure of Cu(I)Cusf


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Cu(I)Cusf within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cu1089

b:36.0
occ:0.70
NE2 X:HIS36 2.0 38.3 1.0
SD X:MET47 2.2 43.5 1.0
SD X:MET49 2.2 37.8 1.0
CE3 X:TRP44 2.7 32.2 1.0
CE1 X:HIS36 2.8 38.3 1.0
CZ3 X:TRP44 2.9 31.7 1.0
CG X:MET49 3.0 37.9 1.0
CD2 X:HIS36 3.1 38.3 1.0
CG X:MET47 3.3 40.4 1.0
CE X:MET49 3.3 41.2 1.0
CB X:MET47 3.5 38.8 1.0
CD2 X:TRP44 3.5 32.3 1.0
CE X:MET47 3.5 40.6 1.0
CH2 X:TRP44 3.8 31.9 1.0
ND1 X:HIS36 4.0 37.2 1.0
CG X:HIS36 4.2 35.5 1.0
CE2 X:TRP44 4.2 32.5 1.0
CG X:TRP44 4.3 30.9 1.0
CB X:MET49 4.4 36.2 1.0
CZ2 X:TRP44 4.4 32.4 1.0
CB X:TRP44 4.6 31.6 1.0
CA X:MET47 4.8 38.6 1.0

Reference:

Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran. Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf. Nat.Chem.Biol. V. 4 107 2008.
ISSN: ISSN 1552-4450
PubMed: 18157124
DOI: 10.1038/NCHEMBIO.2007.57
Page generated: Thu Sep 3 16:51:26 2020
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