Copper in the structure of Conjugative Relaxase Trwc in Complex With Orit Dna, Cooper- Bound Structure (pdb 1zm5)

The binding sites of Copper atom in the structure of Conjugative Relaxase Trwc in Complex With Orit Dna, Cooper- Bound Structure (pdb code 1zm5). This binding sites where shown with 5.0 Angstroms radius around Copper atom. The 1zm5 structure was solved by R.BOER, S.RUSSI, A.GUASCH, M.LUCAS, A.G.BLANCO, M.COLL, F.DE LACRUZ, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 24.7-2.5 Space group P6122 a (A) 91.077 b (A) 91.077 c (A) 205.551 alpha (°) 90.00 beta (°) 90.00 gamma (°) 120.00 Rfactor (%) 23.3 Rfree (%) 27.6 Copper Binding Sites: Copper binding site 1 out of 1 in 1zm5 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 1zm5. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Dt25, A: His150, A: His161, A: His163, A: Hoh315, A: Hoh371, A: Hoh377, A: Hoh416, A: Hoh437, A: Hoh458, conact list: Atom Atom Distance (A) Cu O3' B:Dt25 4.66 Cu NE2 A:His150 4.65 Cu CB A:His150 3.55 Cu ND1 A:His150 2.53 Cu CD2 A:His150 4.61 Cu CE1 A:His150 3.56 Cu CG A:His150 3.42 Cu NE2 A:His161 2.23 Cu ND1 A:His161 4.24 Cu CD2 A:His161 3.07 Cu CE1 A:His161 3.21 Cu CG A:His161 4.21 Cu NE2 A:His163 2.24 Cu ND1 A:His163 4.35 Cu CD2 A:His163 3.02 Cu CE1 A:His163 3.33 Cu CG A:His163 4.24 Cu O A:Hoh315 4.32 Cu O A:Hoh371 3.89 Cu O A:Hoh377 3.84 Cu O A:Hoh416 2.87 Cu O A:Hoh437 3.84 Cu O A:Hoh458 2.18 interactive model: