Atomistry » Copper » PDB 1x9r-2ahl » 1zia
Atomistry »
  Copper »
    PDB 1x9r-2ahl »
      1zia »

Copper in PDB 1zia: Oxidized Pseudoazurin

Protein crystallography data

The structure of Oxidized Pseudoazurin, PDB code: 1zia was solved by T.Inoue, N.Nishio, S.Hamanaka, T.Shimomura, S.Harada, S.Suzuki, T.Kohzuma, S.Shidara, H.Iwasaki, Y.Kai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.54
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.690, 61.530, 30.200, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Copper Binding Sites:

The binding sites of Copper atom in the Oxidized Pseudoazurin (pdb code 1zia). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Oxidized Pseudoazurin, PDB code: 1zia:

Copper binding site 1 out of 1 in 1zia

Go back to Copper Binding Sites List in 1zia
Copper binding site 1 out of 1 in the Oxidized Pseudoazurin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Oxidized Pseudoazurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu125

b:15.0
occ:1.00
ND1 A:HIS40 1.9 12.0 1.0
ND1 A:HIS81 2.0 13.3 1.0
SG A:CYS78 2.1 13.5 1.0
SD A:MET86 2.7 12.9 1.0
CE1 A:HIS40 2.9 12.8 1.0
CG A:HIS40 3.0 9.8 1.0
CE1 A:HIS81 3.0 12.6 1.0
CG A:HIS81 3.0 13.2 1.0
CB A:CYS78 3.2 10.6 1.0
CB A:HIS40 3.4 10.3 1.0
CE A:MET86 3.4 14.2 1.0
CB A:HIS81 3.4 12.9 1.0
CA A:HIS40 3.6 10.8 1.0
NE2 A:HIS40 4.0 14.2 1.0
O A:GLY39 4.0 13.3 1.0
CD2 A:HIS40 4.1 10.9 1.0
CG A:MET86 4.1 11.7 1.0
NE2 A:HIS81 4.1 13.9 1.0
CD2 A:HIS81 4.2 14.6 1.0
N A:HIS81 4.4 11.1 1.0
N A:HIS40 4.5 10.5 1.0
CG A:PRO80 4.5 12.1 1.0
CA A:CYS78 4.5 8.5 1.0
CB A:MET86 4.5 8.6 1.0
CA A:HIS81 4.6 9.5 1.0
C A:GLY39 4.6 11.4 1.0
C A:HIS40 4.8 10.8 1.0
N A:ASN41 4.8 11.6 1.0
C A:CYS78 4.9 10.9 1.0
CD A:PRO80 5.0 11.3 1.0

Reference:

T.Inoue, N.Nishio, Y.Kai, S.Harada, Y.Ohshiro, S.Suzuki, T.Kohzuma, S.Shidara, H.Iwasaki. Crystallization and Preliminary X-Ray Studies on Pseudoazurin From Achromobacter Cycloclastes IAM1013. J.Biochem.(Tokyo) V. 114 761 1993.
ISSN: ISSN 0021-924X
PubMed: 8138527
Page generated: Wed Oct 28 14:18:22 2020
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy