Chemical elements
    Physical Properties
    Chemical Properties
    Cuprous Compounds
    Complex Copper Compounds
    Cupric Compounds
    PDB 1a2v-1bxu
    PDB 1bxv-1fwx
    PDB 1g3d-1j9t
    PDB 1jcv-1mfm
    PDB 1mg2-1paz
    PDB 1pcs-1sii
    PDB 1sjm-1w6w
    PDB 1w77-2afn
    PDB 2ahk-2dv6
    PDB 2dws-2ggp
    PDB 2ghz-2mta
    PDB 2nrd-2vm3
    PDB 2vm4-2yah
    PDB 2yam-3bkt
    PDB 3bqv-3fyi
    PDB 3g5w-3mie
    PDB 3mif-3t6v
    PDB 3t6w-9pcy

Copper in the structure of Oxidized Pseudoazurin (pdb 1zia)

The binding sites of Copper atom in the structure of Oxidized Pseudoazurin (pdb code 1zia). This binding sites where shown with 5.0 Angstroms radius around Copper atom.
The 1zia structure was solved by T.INOUE, N.NISHIO, S.HAMANAKA, T.SHIMOMURA, S.HARADA, S.SUZUKI, T.KOHZUMA, S.SHIDARA, H.IWASAKI, Y.KAI, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)6.0-1.5
Space groupP212121
a (A)56.690
b (A)61.530
c (A)30.200
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)n/a
Rfree (%)n/a

Copper Binding Sites:

Copper binding site 1 out of 1 in 1zia

Copper binding site 1 out of 1 in 1zia
Click to enlarge
stereopicture of Copper binding site 1 out of 1 in 1zia
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 1zia. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly39, A: His40, A: Asn41, A: Cys78, A: Pro80, A: His81, A: Met86,

conact list:

AtomAtomDistance (A)
CuO A:Gly394.04
CuC A:Gly394.62
CuNE2 A:His403.99
CuN A:His404.47
CuCB A:His403.36
CuND1 A:His401.88
CuCD2 A:His404.07
CuC A:His404.76
CuCE1 A:His402.85
CuCG A:His402.95
CuCA A:His403.61
CuN A:Asn414.76
CuCB A:Cys783.17
CuSG A:Cys782.14
CuC A:Cys784.90
CuCA A:Cys784.51
CuCD A:Pro805.00
CuCG A:Pro804.50
CuNE2 A:His814.12
CuN A:His814.43
CuCB A:His813.44
CuND1 A:His811.99
CuCD2 A:His814.17
CuCE1 A:His812.96
CuCG A:His813.02
CuCA A:His814.60
CuCB A:Met864.51
CuCE A:Met863.43
CuCG A:Met864.07
CuSD A:Met862.71

interactive model:

© Copyright 2008-2012 by