Copper in the structure of uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin (pdb 1ylb)

The binding sites of Copper atom in the structure of uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin (pdb code 1ylb). This binding sites where shown with 5.0 Angstroms radius around Copper atom. The 1ylb structure was solved by F.MUSIANI, A.DIKIY, A.Y.SEMENOV, S.CIURLI, with NMR in Solution technique. Copper Binding Sites: Copper binding site 1 out of 1 in 1ylb Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 1ylb. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Leu5, B: Leu12, B: Pro36, B: His37, B: Asn38, B: Cys84, B: Pro86, B: His87, B: Met92, conact list: Atom Atom Distance (A) Cu HD21 B:Leu5 3.74 Cu HB3 B:Leu5 4.72 Cu CD2 B:Leu5 4.76 Cu HG B:Leu12 4.79 Cu HD12 B:Leu12 4.52 Cu O B:Pro36 4.22 Cu HB2 B:His37 4.63 Cu N B:His37 4.99 Cu CB B:His37 3.60 Cu HB3 B:His37 3.22 Cu CD2 B:His37 4.28 Cu CG B:His37 3.14 Cu CA B:His37 4.02 Cu NE2 B:His37 4.21 Cu HA B:His37 3.34 Cu HE1 B:His37 3.28 Cu ND1 B:His37 2.07 Cu CE1 B:His37 3.06 Cu N B:Asn38 4.86 Cu OD1 B:Asn38 5.00 Cu H B:Asn38 4.05 Cu O B:Cys84 4.65 Cu HB2 B:Cys84 3.78 Cu CB B:Cys84 3.29 Cu HB3 B:Cys84 3.20 Cu SG B:Cys84 2.12 Cu C B:Cys84 4.86 Cu CA B:Cys84 4.59 Cu HB2 B:Pro86 4.26 Cu HD2 B:Pro86 4.11 Cu HG2 B:Pro86 4.52 Cu HB2 B:His87 2.98 Cu N B:His87 4.75 Cu CB B:His87 3.59 Cu HB3 B:His87 4.14 Cu CD2 B:His87 4.29 Cu CG B:His87 3.15 Cu CA B:His87 4.81 Cu NE2 B:His87 4.24 Cu HE1 B:His87 3.30 Cu ND1 B:His87 2.09 Cu H B:His87 4.29 Cu CE1 B:His87 3.08 Cu HB2 B:Met92 4.72 Cu CB B:Met92 4.74 Cu HB3 B:Met92 4.41 Cu CG B:Met92 4.35 Cu SD B:Met92 3.10 Cu HG2 B:Met92 4.46 Cu CE B:Met92 4.24 Cu HE1 B:Met92 4.22 Cu HE2 B:Met92 4.35 interactive model: