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Copper in PDB 1ylb: uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin

Copper Binding Sites:

The binding sites of Copper atom in the uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin (pdb code 1ylb). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin, PDB code: 1ylb:

Copper binding site 1 out of 1 in 1ylb

Go back to Copper Binding Sites List in 1ylb
Copper binding site 1 out of 1 in the uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of uc(Nmr) Solution Structure of the Reduced Spinach Plastocyanin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu100

b:0.1
occ:-0.01
ND1 B:HIS37 2.1 -0.1 -0.0
ND1 B:HIS87 2.1 -0.1 -0.0
SG B:CYS84 2.1 -0.1 1.0
HB2 B:HIS87 3.0 0.0 0.1
CE1 B:HIS37 3.1 0.0 -0.1
CE1 B:HIS87 3.1 0.0 -0.2
SD B:MET92 3.1 -0.0 1.0
CG B:HIS37 3.1 0.0 -0.0
CG B:HIS87 3.1 0.0 -0.1
HB3 B:CYS84 3.2 0.0 0.1
HB3 B:HIS37 3.2 0.0 0.1
HE1 B:HIS37 3.3 0.0 0.1
CB B:CYS84 3.3 -0.0 1.0
HE1 B:HIS87 3.3 0.0 0.1
HA B:HIS37 3.3 0.0 0.1
CB B:HIS87 3.6 0.0 -0.1
CB B:HIS37 3.6 0.0 1.0
HD21 B:LEU5 3.7 0.0 0.1
HB2 B:CYS84 3.8 0.0 0.1
CA B:HIS37 4.0 -0.0 1.0
H B:ASN38 4.1 0.0 0.1
HD2 B:PRO86 4.1 0.0 0.1
HB3 B:HIS87 4.1 0.0 0.1
NE2 B:HIS37 4.2 -0.0 -0.0
O B:PRO36 4.2 -0.1 0.2
HE1 B:MET92 4.2 0.0 0.1
CE B:MET92 4.2 0.0 1.0
NE2 B:HIS87 4.2 -0.0 -0.2
HB2 B:PRO86 4.3 0.0 0.1
CD2 B:HIS37 4.3 -0.0 -0.0
H B:HIS87 4.3 0.0 0.1
CD2 B:HIS87 4.3 -0.0 -0.2
CG B:MET92 4.3 0.0 1.0
HE2 B:MET92 4.4 0.0 0.1
HB3 B:MET92 4.4 0.0 0.1
HG2 B:MET92 4.5 0.0 0.1
HD12 B:LEU12 4.5 0.0 0.1
HG2 B:PRO86 4.5 0.0 0.1
CA B:CYS84 4.6 0.0 1.0
HB2 B:HIS37 4.6 0.0 0.1
O B:CYS84 4.7 -0.1 0.2
HB2 B:MET92 4.7 0.0 0.1
HB3 B:LEU5 4.7 0.0 0.1
CB B:MET92 4.7 0.0 1.0
N B:HIS87 4.7 -0.0 -0.1
CD2 B:LEU5 4.8 -0.0 1.0
HG B:LEU12 4.8 0.0 0.1
CA B:HIS87 4.8 0.0 -0.1
C B:CYS84 4.9 0.1 -0.0
N B:ASN38 4.9 -0.0 1.0
N B:HIS37 5.0 -0.0 1.0
OD1 B:ASN38 5.0 -0.1 0.2

Reference:

F.Musiani, A.Dikiy, A.Y.Semenov, S.Ciurli. Structure of the Intermolecular Complex Between Plastocyanin and Cytochrome F From Spinach. J.Biol.Chem. V. 280 18833 2005.
ISSN: ISSN 0021-9258
PubMed: 15691836
DOI: 10.1074/JBC.M412760200
Page generated: Wed Oct 28 14:18:17 2020
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