Atomistry » Copper » PDB 1oe2-1rjp » 1plc
Atomistry »
  Copper »
    PDB 1oe2-1rjp »
      1plc »

Copper in PDB 1plc: Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution

Protein crystallography data

The structure of Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution, PDB code: 1plc was solved by J.M.Guss, H.C.Freeman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.33
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 29.600, 46.860, 57.600, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Copper Binding Sites:

The binding sites of Copper atom in the Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution (pdb code 1plc). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution, PDB code: 1plc:

Copper binding site 1 out of 1 in 1plc

Go back to Copper Binding Sites List in 1plc
Copper binding site 1 out of 1 in the Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Accuracy and Precision in Protein Crystal Structure Analysis: Restrained Least-Squares Refinement of the Crystal Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu100

b:8.8
occ:1.00
ND1 A:HIS37 1.9 7.6 1.0
ND1 A:HIS87 2.1 9.6 1.0
SG A:CYS84 2.1 7.0 1.0
SD A:MET92 2.8 7.5 1.0
CE1 A:HIS37 2.9 10.0 1.0
HB2 A:HIS87 3.0 3.6 1.0
CG A:HIS37 3.0 7.4 1.0
CE1 A:HIS87 3.0 13.5 1.0
HE1 A:HIS37 3.0 6.7 1.0
HE3 A:MET92 3.0 6.0 1.0
CG A:HIS87 3.1 10.6 1.0
HA A:HIS37 3.1 3.8 1.0
CB A:CYS84 3.2 9.0 1.0
HB3 A:CYS84 3.2 7.2 1.0
HE1 A:HIS87 3.2 11.3 1.0
HB2 A:CYS84 3.3 9.5 1.0
HB3 A:HIS37 3.3 2.0 1.0
CB A:HIS37 3.4 8.7 1.0
CB A:HIS87 3.4 6.5 1.0
CE A:MET92 3.5 8.0 1.0
HG2 A:PRO86 3.6 8.7 1.0
CA A:HIS37 3.7 7.1 1.0
O A:PRO36 3.9 9.7 1.0
H A:ASN38 3.9 8.3 1.0
HE1 A:MET92 3.9 4.0 1.0
HB3 A:HIS87 4.0 5.2 1.0
NE2 A:HIS37 4.0 9.9 1.0
HD21 A:LEU12 4.1 15.6 1.0
CD2 A:HIS37 4.1 8.9 1.0
H A:HIS87 4.1 10.2 1.0
CG A:MET92 4.1 7.6 1.0
NE2 A:HIS87 4.1 12.2 1.0
HG2 A:MET92 4.1 6.8 1.0
HB3 A:MET92 4.2 6.0 1.0
HE2 A:MET92 4.2 5.2 1.0
CD2 A:HIS87 4.2 10.7 1.0
HB2 A:HIS37 4.4 2.0 1.0
CA A:CYS84 4.5 4.2 1.0
CG A:PRO86 4.5 11.1 1.0
N A:HIS87 4.6 8.2 1.0
HD2 A:PRO86 4.6 4.2 1.0
CB A:MET92 4.6 6.7 1.0
N A:ASN38 4.6 5.7 1.0
N A:HIS37 4.6 9.1 1.0
C A:PRO36 4.7 9.1 1.0
CA A:HIS87 4.7 7.4 1.0
HB2 A:MET92 4.7 10.3 1.0
C A:HIS37 4.8 9.9 1.0
HA A:CYS84 4.8 4.0 1.0
HE2 A:HIS37 4.9 9.0 1.0
HG3 A:PRO86 4.9 8.8 1.0
C A:CYS84 4.9 4.6 1.0
HB3 A:LEU12 4.9 3.7 1.0
CD A:PRO86 4.9 6.4 1.0
HG3 A:MET92 4.9 6.0 1.0
HE2 A:HIS87 5.0 12.6 1.0

Reference:

J.M.Guss, H.D.Bartunik, H.C.Freeman. Accuracy and Precision in Protein Structure Analysis: Restrained Least-Squares Refinement of the Structure of Poplar Plastocyanin at 1.33 A Resolution. Acta Crystallogr.,Sect.B V. 48 790 1992.
ISSN: ISSN 0108-7681
PubMed: 1492962
DOI: 10.1107/S0108768192004270
Page generated: Tue Jul 30 22:34:58 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy