Copper in PDB 1niq: Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein
Copper Binding Sites:
The binding sites of Copper atom in the Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein
(pdb code 1niq). This binding sites where shown within
5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the
Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein, PDB code: 1niq:
Jump to Copper binding site number:
1;
2;
Copper binding site 1 out
of 2 in 1niq
Go back to
Copper Binding Sites List in 1niq
Copper binding site 1 out
of 2 in the Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 1 of Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cu402
b:0.0
occ:1.00
|
NG
|
B:BLM2402
|
1.5
|
0.0
|
1.0
|
NH
|
B:BLM2402
|
1.5
|
0.0
|
1.0
|
NC
|
B:BLM2402
|
1.6
|
0.0
|
1.0
|
C7
|
B:BLM2402
|
2.4
|
0.0
|
1.0
|
C10
|
B:BLM2402
|
2.5
|
0.0
|
1.0
|
C12
|
B:BLM2402
|
2.5
|
0.0
|
1.0
|
C6
|
B:BLM2402
|
2.5
|
0.0
|
1.0
|
HB1
|
B:BLM2402
|
2.6
|
0.0
|
1.0
|
C13
|
B:BLM2402
|
2.6
|
0.0
|
1.0
|
H6
|
B:BLM2402
|
2.7
|
0.0
|
1.0
|
NJ
|
B:BLM2402
|
2.7
|
0.0
|
1.0
|
HNK
|
B:BLM2402
|
2.7
|
0.0
|
1.0
|
C3
|
B:BLM2402
|
2.8
|
0.0
|
1.0
|
NB
|
B:BLM2402
|
2.9
|
0.0
|
1.0
|
H3E
|
B:BLM2402
|
3.2
|
0.0
|
1.0
|
C30
|
B:BLM2402
|
3.3
|
0.0
|
1.0
|
C2
|
B:BLM2402
|
3.3
|
0.0
|
1.0
|
NK
|
B:BLM2402
|
3.4
|
0.0
|
1.0
|
C14
|
B:BLM2402
|
3.4
|
0.0
|
1.0
|
C27
|
B:BLM2402
|
3.4
|
0.0
|
1.0
|
HD22
|
B:LEU113
|
3.5
|
100.0
|
1.0
|
H13
|
B:BLM2402
|
3.5
|
0.0
|
1.0
|
H3X
|
B:BLM2402
|
3.6
|
0.0
|
1.0
|
NE
|
B:BLM2402
|
3.7
|
0.0
|
1.0
|
O12
|
B:BLM2402
|
3.7
|
0.0
|
1.0
|
C9
|
B:BLM2402
|
3.8
|
0.0
|
1.0
|
HB2
|
B:BLM2402
|
3.9
|
0.0
|
1.0
|
C5
|
B:BLM2402
|
4.0
|
0.0
|
1.0
|
OH1
|
B:BLM2402
|
4.0
|
0.0
|
1.0
|
C29
|
B:BLM2402
|
4.0
|
0.0
|
1.0
|
HD23
|
B:LEU113
|
4.0
|
100.0
|
1.0
|
O70
|
B:BLM2402
|
4.1
|
0.0
|
1.0
|
C8
|
B:BLM2402
|
4.2
|
0.0
|
1.0
|
C1
|
B:BLM2402
|
4.2
|
0.0
|
1.0
|
H2
|
B:BLM2402
|
4.3
|
0.0
|
1.0
|
H68
|
B:BLM2402
|
4.3
|
0.0
|
1.0
|
H5X
|
B:BLM2402
|
4.3
|
0.0
|
1.0
|
HD13
|
B:LEU113
|
4.3
|
100.0
|
1.0
|
CD2
|
B:LEU113
|
4.3
|
0.0
|
1.0
|
H29
|
B:BLM2402
|
4.3
|
0.0
|
1.0
|
H14
|
B:BLM2402
|
4.4
|
0.0
|
1.0
|
O30
|
B:BLM2402
|
4.4
|
0.0
|
1.0
|
O1
|
B:BLM2402
|
4.5
|
0.0
|
1.0
|
H5E
|
B:BLM2402
|
4.6
|
0.0
|
1.0
|
H34
|
B:BLM2402
|
4.7
|
0.0
|
1.0
|
HD12
|
B:LEU113
|
4.7
|
100.0
|
1.0
|
C4
|
B:BLM2402
|
4.8
|
0.0
|
1.0
|
C28
|
B:BLM2402
|
4.8
|
0.0
|
1.0
|
C31
|
B:BLM2402
|
4.8
|
0.0
|
1.0
|
CD1
|
B:LEU113
|
4.9
|
0.0
|
1.0
|
HO58
|
B:BLM2402
|
4.9
|
0.0
|
1.0
|
HD21
|
B:LEU113
|
5.0
|
100.0
|
1.0
|
|
Copper binding site 2 out
of 2 in 1niq
Go back to
Copper Binding Sites List in 1niq
Copper binding site 2 out
of 2 in the Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 2 of Solution Structure of the Hoo-Bm Bound Blmt, Transposon TN5- Encoding Bleomycin-Binding Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cu1402
b:0.0
occ:1.00
|
NG
|
B:BLM3402
|
1.5
|
0.0
|
1.0
|
NH
|
B:BLM3402
|
1.5
|
0.0
|
1.0
|
NC
|
B:BLM3402
|
1.5
|
0.0
|
1.0
|
C7
|
B:BLM3402
|
2.4
|
0.0
|
1.0
|
C10
|
B:BLM3402
|
2.5
|
0.0
|
1.0
|
C12
|
B:BLM3402
|
2.5
|
0.0
|
1.0
|
C6
|
B:BLM3402
|
2.5
|
0.0
|
1.0
|
HB1
|
B:BLM3402
|
2.6
|
0.0
|
1.0
|
C13
|
B:BLM3402
|
2.6
|
0.0
|
1.0
|
H6
|
B:BLM3402
|
2.7
|
0.0
|
1.0
|
NJ
|
B:BLM3402
|
2.7
|
0.0
|
1.0
|
HNK
|
B:BLM3402
|
2.7
|
0.0
|
1.0
|
C3
|
B:BLM3402
|
2.7
|
0.0
|
1.0
|
NB
|
B:BLM3402
|
2.9
|
0.0
|
1.0
|
H3E
|
B:BLM3402
|
3.2
|
0.0
|
1.0
|
C30
|
B:BLM3402
|
3.3
|
0.0
|
1.0
|
C2
|
B:BLM3402
|
3.3
|
0.0
|
1.0
|
NK
|
B:BLM3402
|
3.4
|
0.0
|
1.0
|
C14
|
B:BLM3402
|
3.4
|
0.0
|
1.0
|
C27
|
B:BLM3402
|
3.4
|
0.0
|
1.0
|
HD22
|
C:LEU113
|
3.5
|
100.0
|
1.0
|
H13
|
B:BLM3402
|
3.5
|
0.0
|
1.0
|
H3X
|
B:BLM3402
|
3.6
|
0.0
|
1.0
|
NE
|
B:BLM3402
|
3.7
|
0.0
|
1.0
|
O12
|
B:BLM3402
|
3.7
|
0.0
|
1.0
|
C9
|
B:BLM3402
|
3.8
|
0.0
|
1.0
|
HB2
|
B:BLM3402
|
3.9
|
0.0
|
1.0
|
C5
|
B:BLM3402
|
4.0
|
0.0
|
1.0
|
OH1
|
B:BLM3402
|
4.0
|
0.0
|
1.0
|
HD23
|
C:LEU113
|
4.0
|
100.0
|
1.0
|
C29
|
B:BLM3402
|
4.0
|
0.0
|
1.0
|
O70
|
B:BLM3402
|
4.1
|
0.0
|
1.0
|
C8
|
B:BLM3402
|
4.2
|
0.0
|
1.0
|
C1
|
B:BLM3402
|
4.3
|
0.0
|
1.0
|
H2
|
B:BLM3402
|
4.3
|
0.0
|
1.0
|
HD13
|
C:LEU113
|
4.3
|
100.0
|
1.0
|
H5X
|
B:BLM3402
|
4.3
|
0.0
|
1.0
|
CD2
|
C:LEU113
|
4.3
|
0.0
|
1.0
|
H68
|
B:BLM3402
|
4.3
|
0.0
|
1.0
|
H29
|
B:BLM3402
|
4.3
|
0.0
|
1.0
|
H14
|
B:BLM3402
|
4.4
|
0.0
|
1.0
|
O30
|
B:BLM3402
|
4.4
|
0.0
|
1.0
|
O1
|
B:BLM3402
|
4.5
|
0.0
|
1.0
|
H5E
|
B:BLM3402
|
4.6
|
0.0
|
1.0
|
HD12
|
C:LEU113
|
4.7
|
100.0
|
1.0
|
H34
|
B:BLM3402
|
4.7
|
0.0
|
1.0
|
C4
|
B:BLM3402
|
4.8
|
0.0
|
1.0
|
C28
|
B:BLM3402
|
4.8
|
0.0
|
1.0
|
C31
|
B:BLM3402
|
4.8
|
0.0
|
1.0
|
CD1
|
C:LEU113
|
4.9
|
0.0
|
1.0
|
HO58
|
B:BLM3402
|
4.9
|
0.0
|
1.0
|
HD21
|
C:LEU113
|
5.0
|
100.0
|
1.0
|
|
Reference:
M.Sugiyama,
M.Sugiyama.
N/A N/A.
Page generated: Tue Jul 30 22:28:20 2024
|