Chemical elements
  Copper
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    Cuprous Compounds
    Complex Copper Compounds
    Cupric Compounds
    PDB 1a2v-1bxu
    PDB 1bxv-1fwx
    PDB 1g3d-1j9t
    PDB 1jcv-1mfm
      1jcv
      1jer
      1jes
      1jif
      1joi
      1jrq
      1js8
      1juh
      1jvl
      1jvo
      1jxd
      1jxf
      1jxg
      1jze
      1jzf
      1jzg
      1jzh
      1jzi
      1jzj
      1k0v
      1kbv
      1kbw
      1kcb
      1kcw
      1kdi
      1kdj
      1keb
      1kqk
      1ksi
      1kv7
      1kvj
      1kya
      1kyr
      1l3n
      1l9o
      1l9p
      1l9q
      1l9r
      1l9s
      1l9t
      1lcf
      1lfi
      1ll1
      1lla
      1lnl
      1lvn
      1m56
      1m57
      1mda
      1mfm
    PDB 1mg2-1paz
    PDB 1pcs-1sii
    PDB 1sjm-1w6w
    PDB 1w77-2afn
    PDB 2ahk-2dv6
    PDB 2dws-2ggp
    PDB 2ghz-2mta
    PDB 2nrd-2vm3
    PDB 2vm4-2yah
    PDB 2yam-3bkt
    PDB 3bqv-3fyi
    PDB 3g5w-3mie
    PDB 3mif-3t6v
    PDB 3t6w-9pcy

Copper in the structure of Pseudomonas Aeruginosa Azurin Ru(Bpy)2(Im)(HIS83) (pdb 1jze)






The binding sites of Copper atom in the structure of Pseudomonas Aeruginosa Azurin Ru(Bpy)2(Im)(HIS83) (pdb code 1jze). This binding sites where shown with 5.0 Angstroms radius around Copper atom.
The 1jze structure was solved by B.R.CRANE, A.J.DI BILIO, J.R.WINKLER, H.B.GRAY, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)26.7-1.6
Space groupI222
a (A)53.430
b (A)61.760
c (A)68.780
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)24.9
Rfree (%)27.4


Copper Binding Sites:

Copper binding site 1 out of 2 in 1jze


Copper binding site 1 out of 2 in 1jze
Click to enlarge
stereopicture of Copper binding site 1 out of 2 in 1jze
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 1jze. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met44, A: Gly45, A: His46, A: Asn47, A: Cys112, A: Phe114, A: His117, A: Met121,

conact list:


AtomAtomDistance (A)
CuO A:Met444.97
CuO A:Gly452.65
CuC A:Gly453.63
CuCA A:Gly454.97
CuNE2 A:His463.98
CuN A:His463.95
CuCB A:His463.55
CuND1 A:His461.96
CuCD2 A:His464.12
CuC A:His464.54
CuCE1 A:His462.82
CuCG A:His463.07
CuCA A:His463.36
CuN A:Asn474.56
CuCB A:Cys1123.28
CuSG A:Cys1122.17
CuCA A:Cys1124.68
CuN A:Phe1144.83
CuCB A:Phe1143.86
CuCG A:Phe1144.69
CuCA A:Phe1144.95
CuNE2 A:His1174.03
CuCB A:His1173.44
CuND1 A:His1171.97
CuCD2 A:His1174.12
CuCE1 A:His1172.88
CuCG A:His1173.04
CuCA A:His1174.94
CuCB A:Met1214.91
CuCE A:Met1213.63
CuCG A:Met1214.60
CuSD A:Met1213.13

interactive model:


Copper binding site 2 out of 2 in 1jze


Copper binding site 2 out of 2 in 1jze
Click to enlarge
stereopicture of Copper binding site 2 out of 2 in 1jze
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Copper in the PDB 1jze. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala1, A: Glu2, A: Cys3, A: Hoh386, A: Hoh387, A: Hoh430,

conact list:


AtomAtomDistance (A)
CuO A:Ala12.42
CuN A:Ala12.77
CuC A:Ala13.04
CuCB A:Ala14.54
CuCA A:Ala13.04
CuN A:Glu24.33
CuCA A:Glu24.84
CuSG A:Cys34.35
CuO A:Hoh3863.90
CuO A:Hoh3874.01
CuO A:Hoh4304.78

interactive model:




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