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Copper in PDB 1j5d: Solution Structure of Oxidized Paramagnetic Cu(II) Plastocyanin From Synechocystis PCC6803-Minimized Average Structure

Copper Binding Sites:

The binding sites of Copper atom in the Solution Structure of Oxidized Paramagnetic Cu(II) Plastocyanin From Synechocystis PCC6803-Minimized Average Structure (pdb code 1j5d). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Solution Structure of Oxidized Paramagnetic Cu(II) Plastocyanin From Synechocystis PCC6803-Minimized Average Structure, PDB code: 1j5d:

Copper binding site 1 out of 1 in 1j5d

Go back to Copper Binding Sites List in 1j5d
Copper binding site 1 out of 1 in the Solution Structure of Oxidized Paramagnetic Cu(II) Plastocyanin From Synechocystis PCC6803-Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Solution Structure of Oxidized Paramagnetic Cu(II) Plastocyanin From Synechocystis PCC6803-Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu99

b:10.0
occ:1.00
ND1 A:HIS86 2.2 10.0 1.0
ND1 A:HIS39 2.2 10.0 1.0
SG A:CYS83 2.3 10.0 1.0
SD A:MET91 2.7 10.0 1.0
HE1 A:MET91 2.9 10.0 1.0
HA A:HIS39 3.0 10.0 1.0
CE1 A:HIS86 3.1 10.0 1.0
CG A:HIS86 3.2 10.0 1.0
CE1 A:HIS39 3.2 10.0 1.0
CB A:CYS83 3.2 10.0 1.0
HB3 A:CYS83 3.2 10.0 1.0
CG A:HIS39 3.3 10.0 1.0
HB2 A:CYS83 3.3 10.0 1.0
HB2 A:HIS86 3.3 10.0 1.0
CE A:MET91 3.3 10.0 1.0
HE1 A:HIS86 3.4 10.0 1.0
HE1 A:HIS39 3.4 10.0 1.0
HB3 A:HIS86 3.5 10.0 1.0
CB A:HIS86 3.6 10.0 1.0
HB3 A:HIS39 3.7 10.0 1.0
HE1 A:PHE16 3.7 10.0 1.0
H A:ASN40 3.7 10.0 1.0
CB A:HIS39 3.8 10.0 1.0
HE2 A:MET91 3.9 10.0 1.0
CA A:HIS39 3.9 10.0 1.0
HE3 A:MET91 4.2 10.0 1.0
O A:ASN40 4.2 10.0 1.0
NE2 A:HIS86 4.3 10.0 1.0
CG A:MET91 4.3 10.0 1.0
CD2 A:HIS86 4.3 10.0 1.0
NE2 A:HIS39 4.3 10.0 1.0
CD2 A:HIS39 4.4 10.0 1.0
O A:PRO38 4.4 10.0 1.0
HB3 A:MET91 4.5 10.0 1.0
N A:ASN40 4.6 10.0 1.0
CA A:CYS83 4.7 10.0 1.0
HG3 A:MET91 4.7 10.0 1.0
CE1 A:PHE16 4.7 10.0 1.0
HB2 A:MET91 4.8 10.0 1.0
CB A:MET91 4.8 10.0 1.0
HB3 A:MET7 4.8 10.0 1.0
C A:HIS39 4.8 10.0 1.0
HB2 A:HIS39 4.9 10.0 1.0
N A:HIS39 4.9 10.0 1.0
O A:LEU36 4.9 10.0 1.0
HA A:CYS83 4.9 10.0 1.0
O A:CYS83 4.9 10.0 1.0
HG2 A:MET91 5.0 10.0 1.0

Reference:

I.Bertini, S.Ciurli, A.Dikiy, C.O.Fernandez, C.Luchinat, N.Safarov, S.Shumilin, A.J.Vila. The First Solution Structure of A Paramagnetic Copper(II) Protein: the Case of Oxidized Plastocyanin From the Cyanobacterium Synechocystis PCC6803. J.Am.Chem.Soc. V. 123 2405 2001.
ISSN: ISSN 0002-7863
PubMed: 11456890
DOI: 10.1021/JA0033685
Page generated: Sun Dec 13 10:59:33 2020

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