Atomistry » Copper » PDB 1eso-1haw » 1gy2
Atomistry »
  Copper »
    PDB 1eso-1haw »
      1gy2 »

Copper in PDB 1gy2: Crystal Structure of MET148LEU Rusticyanin

Protein crystallography data

The structure of Crystal Structure of MET148LEU Rusticyanin, PDB code: 1gy2 was solved by M.A.Hough, L.D.Kanbi, S.Antonyuk, F.Dodd, S.Hasnain, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.4 / 1.82
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 43.450, 61.430, 53.470, 90.00, 96.31, 90.00
R / Rfree (%) 18.3 / 21.9

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of MET148LEU Rusticyanin (pdb code 1gy2). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structure of MET148LEU Rusticyanin, PDB code: 1gy2:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 1gy2

Go back to Copper Binding Sites List in 1gy2
Copper binding site 1 out of 2 in the Crystal Structure of MET148LEU Rusticyanin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of MET148LEU Rusticyanin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu1156

b:11.8
occ:1.00
ND1 A:HIS143 2.0 11.0 1.0
ND1 A:HIS85 2.1 9.9 1.0
SG A:CYS138 2.2 10.8 1.0
CE1 A:HIS85 3.0 11.9 1.0
CE1 A:HIS143 3.0 12.2 1.0
CG A:HIS143 3.0 11.6 1.0
CD2 A:LEU148 3.1 11.6 1.0
CG A:HIS85 3.1 10.7 1.0
CB A:CYS138 3.3 10.7 1.0
CB A:HIS143 3.4 11.0 1.0
CD1 A:ILE140 3.5 12.6 1.0
CB A:HIS85 3.5 10.5 1.0
CB A:ILE140 3.6 12.6 1.0
CG1 A:ILE140 3.7 12.9 1.0
CA A:HIS85 3.8 11.3 1.0
NE2 A:HIS143 4.1 13.5 1.0
NE2 A:HIS85 4.1 11.0 1.0
CD2 A:HIS143 4.2 13.1 1.0
CD2 A:HIS85 4.2 11.3 1.0
CG2 A:ILE140 4.5 10.6 1.0
CG A:LEU148 4.5 11.2 1.0
N A:ILE140 4.6 12.9 1.0
N A:HIS85 4.6 11.8 1.0
CA A:CYS138 4.7 10.6 1.0
CA A:ILE140 4.7 12.9 1.0
N A:SER86 4.7 10.7 1.0
C A:HIS85 4.8 10.8 1.0
CA A:HIS143 4.9 10.8 1.0

Copper binding site 2 out of 2 in 1gy2

Go back to Copper Binding Sites List in 1gy2
Copper binding site 2 out of 2 in the Crystal Structure of MET148LEU Rusticyanin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of MET148LEU Rusticyanin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu1156

b:13.2
occ:1.00
ND1 B:HIS143 2.0 11.8 1.0
ND1 B:HIS85 2.1 12.4 1.0
SG B:CYS138 2.2 12.3 1.0
CE1 B:HIS85 3.0 12.8 1.0
CE1 B:HIS143 3.0 13.7 1.0
CG B:HIS143 3.0 13.2 1.0
CD2 B:LEU148 3.1 12.3 1.0
CG B:HIS85 3.1 11.2 1.0
CB B:CYS138 3.2 12.4 1.0
CB B:HIS143 3.4 12.0 1.0
CD1 B:ILE140 3.5 15.4 1.0
CB B:HIS85 3.5 12.0 1.0
CB B:ILE140 3.7 13.6 1.0
CA B:HIS85 3.7 11.6 1.0
CG1 B:ILE140 3.8 14.0 1.0
NE2 B:HIS143 4.1 13.5 1.0
NE2 B:HIS85 4.1 11.0 1.0
CD2 B:HIS143 4.1 14.4 1.0
CD2 B:HIS85 4.2 11.7 1.0
CG B:LEU148 4.4 12.4 1.0
N B:ILE140 4.6 13.3 1.0
CA B:CYS138 4.6 12.0 1.0
CG2 B:ILE140 4.6 14.8 1.0
N B:HIS85 4.7 11.7 1.0
N B:SER86 4.7 11.4 1.0
CA B:ILE140 4.7 13.7 1.0
C B:HIS85 4.8 11.2 1.0
CA B:HIS143 4.9 12.2 1.0
C B:CYS138 5.0 12.3 1.0

Reference:

L.D.Kanbi, S.Antonyuk, M.A.Hough, J.F.Hall, F.Dodd, S.Hasnain. Crystal Structures of the MET148LEU and SER86ASP Mutants of Rusticyanin From Thiobacillus Ferrooxidans: Insights Into the Structural Relationship with the Cupredoxins and the Multi Copper Proteins. J.Mol.Biol. V. 320 263 2002.
ISSN: ISSN 0022-2836
PubMed: 12079384
DOI: 10.1016/S0022-2836(02)00443-6
Page generated: Sun Dec 13 10:59:05 2020

Last articles

Zn in 7O75
Zn in 7O73
Zn in 7O4I
Zn in 7O72
Zn in 7O4J
Zn in 7NVR
Zn in 7NVY
Zn in 7NVZ
Zn in 7NW0
Zn in 7O4K
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy