Atomistry » Copper » PDB 1eso-1haw » 1g3d
Atomistry »
  Copper »
    PDB 1eso-1haw »
      1g3d »

Copper in PDB 1g3d: Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate

Enzymatic activity of Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate

All present enzymatic activity of Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate:
3.4.21.4;

Protein crystallography data

The structure of Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate, PDB code: 1g3d was solved by E.Toyota, K.K.S.Ng, H.Sekizaki, K.Itoh, K.Tanizawa, M.N.G.James, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.36 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.810, 63.260, 69.250, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 18.9

Other elements in 1g3d:

The structure of Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Copper Binding Sites:

The binding sites of Copper atom in the Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate (pdb code 1g3d). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate, PDB code: 1g3d:

Copper binding site 1 out of 1 in 1g3d

Go back to Copper Binding Sites List in 1g3d
Copper binding site 1 out of 1 in the Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Bovine Beta-Trypsin Bound to Meta-Amidino Schiff Base Copper (II) Chelate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu501

b:43.0
occ:1.00
 OXT A:108601 2.1 40.4 1.0
O1 A:108601 2.1 30.5 1.0
O A:HOH722 2.4 23.7 1.0
N A:108601 2.4 35.0 1.0
C A:108601 3.0 39.7 1.0
NE2 A:HIS57 3.1 25.1 1.0
C4 A:108601 3.2 29.8 1.0
CA A:108601 3.3 39.1 1.0
C7 A:108601 3.4 34.0 1.0
CD2 A:HIS57 3.6 23.7 1.0
OG A:SER195 3.6 18.1 1.0
C3 A:108601 3.7 29.9 1.0
O A:SER214 4.1 12.8 1.0
CE1 A:HIS57 4.1 25.5 1.0
O A:108601 4.2 42.6 1.0
CB A:108601 4.3 39.2 1.0
C5 A:108601 4.3 28.8 1.0
CB A:SER195 4.4 14.2 1.0
O A:HOH721 4.5 53.3 1.0
O A:HOH854 4.7 53.8 1.0
CG A:HIS57 4.7 22.8 1.0
ND1 A:HIS57 4.9 23.9 1.0

Reference:

E.Toyota, K.K.Ng, H.Sekizaki, K.Itoh, K.Tanizawa, M.N.James. X-Ray Crystallographic Analyses of Complexes Between Bovine Beta-Trypsin and Schiff Base Copper(II) or Iron(III) Chelates. J.Mol.Biol. V. 305 471 2001.
ISSN: ISSN 0022-2836
PubMed: 11152605
DOI: 10.1006/JMBI.2000.4303
Page generated: Tue Jul 30 21:49:17 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy