Atomistry » Copper » PDB 1bex-1eqw » 1bzo
Atomistry »
  Copper »
    PDB 1bex-1eqw »
      1bzo »

Copper in PDB 1bzo: Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

Enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

All present enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.:
1.15.1.1;

Protein crystallography data

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo was solved by D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.70 / 2.10
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 86.890, 86.890, 99.010, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 26

Other elements in 1bzo:

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Uranium (U) 2 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. (pdb code 1bzo). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo:

Copper binding site 1 out of 1 in 1bzo

Go back to Copper Binding Sites List in 1bzo
Copper binding site 1 out of 1 in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu152

b:28.4
occ:1.00
 NE2 A:HIS46 2.0 20.2 1.0
ND1 A:HIS44 2.1 16.5 1.0
NE2 A:HIS118 2.2 15.6 1.0
CD2 A:HIS46 3.0 17.1 1.0
CE1 A:HIS46 3.1 19.7 1.0
CG A:HIS44 3.1 12.9 1.0
CD2 A:HIS118 3.1 13.7 1.0
CE1 A:HIS44 3.1 12.8 1.0
NE2 A:HIS61 3.2 27.0 1.0
CE1 A:HIS118 3.2 15.9 1.0
CB A:HIS44 3.4 6.0 1.0
O A:HOH533 3.5 23.2 1.0
CD2 A:HIS61 3.5 24.5 1.0
CB A:MET116 3.8 15.2 1.0
CG A:MET116 4.1 14.6 1.0
CG A:HIS46 4.1 16.9 1.0
CE1 A:HIS61 4.2 24.0 1.0
ND1 A:HIS46 4.2 21.9 1.0
CG A:HIS118 4.3 15.1 1.0
CD2 A:HIS44 4.3 19.3 1.0
NE2 A:HIS44 4.3 15.8 1.0
ND1 A:HIS118 4.3 17.9 1.0
N A:HIS44 4.4 21.1 1.0
CA A:HIS44 4.4 11.1 1.0
O A:HOH526 4.4 19.3 1.0
CG A:HIS61 4.6 24.6 1.0
O A:HIS44 4.7 20.8 1.0
C A:HIS44 4.8 16.3 1.0
O A:MET116 4.8 15.7 1.0
ND1 A:HIS61 5.0 25.4 1.0

Reference:

D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri. Evolutionary Constraints For Dimer Formation in Prokaryotic Cu,Zn Superoxide Dismutase. J.Mol.Biol. V. 285 283 1999.
ISSN: ISSN 0022-2836
PubMed: 9878406
DOI: 10.1006/JMBI.1998.2267
Page generated: Sun Dec 13 10:58:15 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy