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Copper in PDB 1bxu: Oxidized Plastocyanin From Synechococcus Sp.

Protein crystallography data

The structure of Oxidized Plastocyanin From Synechococcus Sp., PDB code: 1bxu was solved by T.Inoue, H.Sugawara, S.Hamanaka, H.Tsukui, E.Suzuki, T.Kohzuma, Y.Kai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.90
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 43.100, 43.100, 56.900, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 18.7

Copper Binding Sites:

The binding sites of Copper atom in the Oxidized Plastocyanin From Synechococcus Sp. (pdb code 1bxu). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Oxidized Plastocyanin From Synechococcus Sp., PDB code: 1bxu:

Copper binding site 1 out of 1 in 1bxu

Go back to Copper Binding Sites List in 1bxu
Copper binding site 1 out of 1 in the Oxidized Plastocyanin From Synechococcus Sp.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Oxidized Plastocyanin From Synechococcus Sp. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu200

b:12.2
occ:1.00
ND1 A:HIS37 2.0 8.7 1.0
ND1 A:HIS87 2.0 12.8 1.0
SG A:CYS84 2.1 10.6 1.0
CE1 A:HIS37 2.9 6.6 1.0
SD A:MET92 2.9 9.6 1.0
CE1 A:HIS87 2.9 12.0 1.0
CG A:HIS87 3.0 13.2 1.0
CG A:HIS37 3.0 7.7 1.0
CB A:CYS84 3.2 9.3 1.0
CB A:HIS87 3.4 12.0 1.0
CB A:HIS37 3.4 7.0 1.0
O A:PRO36 3.5 12.0 1.0
CA A:HIS37 3.6 9.2 1.0
CE A:MET92 3.6 7.4 1.0
NE2 A:HIS37 4.0 8.5 1.0
NE2 A:HIS87 4.1 13.9 1.0
CD2 A:HIS37 4.1 7.4 1.0
CD2 A:HIS87 4.1 14.5 1.0
N A:HIS87 4.3 12.9 1.0
C A:PRO36 4.3 11.7 1.0
CG A:MET92 4.4 9.0 1.0
N A:HIS37 4.4 8.8 1.0
CA A:HIS87 4.5 9.8 1.0
CA A:CYS84 4.6 7.8 1.0
CG A:PRO86 4.6 18.7 1.0
N A:ASN38 4.8 10.4 1.0
C A:HIS37 4.8 9.7 1.0
CB A:MET92 4.8 7.0 1.0
C A:CYS84 5.0 9.9 1.0
CD2 A:LEU12 5.0 13.5 1.0

Reference:

T.Inoue, H.Sugawara, S.Hamanaka, H.Tsukui, E.Suzuki, T.Kohzuma, Y.Kai. Crystal Structure Determinations of Oxidized and Reduced Plastocyanin From the Cyanobacterium Synechococcus Sp. Pcc 7942. Biochemistry V. 38 6063 1999.
ISSN: ISSN 0006-2960
PubMed: 10320332
DOI: 10.1021/BI9824442
Page generated: Wed Oct 28 14:13:59 2020
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