Atomistry » Copper » PDB 1bex-1eqw » 1bxu
Atomistry »
  Copper »
    PDB 1bex-1eqw »
      1bxu »

Copper in PDB 1bxu: Oxidized Plastocyanin From Synechococcus Sp.

Protein crystallography data

The structure of Oxidized Plastocyanin From Synechococcus Sp., PDB code: 1bxu was solved by T.Inoue, H.Sugawara, S.Hamanaka, H.Tsukui, E.Suzuki, T.Kohzuma, Y.Kai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.90
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 43.100, 43.100, 56.900, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 18.7

Copper Binding Sites:

The binding sites of Copper atom in the Oxidized Plastocyanin From Synechococcus Sp. (pdb code 1bxu). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Oxidized Plastocyanin From Synechococcus Sp., PDB code: 1bxu:

Copper binding site 1 out of 1 in 1bxu

Go back to Copper Binding Sites List in 1bxu
Copper binding site 1 out of 1 in the Oxidized Plastocyanin From Synechococcus Sp.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Oxidized Plastocyanin From Synechococcus Sp. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu200

b:12.2
occ:1.00
ND1 A:HIS37 2.0 8.7 1.0
ND1 A:HIS87 2.0 12.8 1.0
SG A:CYS84 2.1 10.6 1.0
CE1 A:HIS37 2.9 6.6 1.0
SD A:MET92 2.9 9.6 1.0
CE1 A:HIS87 2.9 12.0 1.0
CG A:HIS87 3.0 13.2 1.0
CG A:HIS37 3.0 7.7 1.0
CB A:CYS84 3.2 9.3 1.0
CB A:HIS87 3.4 12.0 1.0
CB A:HIS37 3.4 7.0 1.0
O A:PRO36 3.5 12.0 1.0
CA A:HIS37 3.6 9.2 1.0
CE A:MET92 3.6 7.4 1.0
NE2 A:HIS37 4.0 8.5 1.0
NE2 A:HIS87 4.1 13.9 1.0
CD2 A:HIS37 4.1 7.4 1.0
CD2 A:HIS87 4.1 14.5 1.0
N A:HIS87 4.3 12.9 1.0
C A:PRO36 4.3 11.7 1.0
CG A:MET92 4.4 9.0 1.0
N A:HIS37 4.4 8.8 1.0
CA A:HIS87 4.5 9.8 1.0
CA A:CYS84 4.6 7.8 1.0
CG A:PRO86 4.6 18.7 1.0
N A:ASN38 4.8 10.4 1.0
C A:HIS37 4.8 9.7 1.0
CB A:MET92 4.8 7.0 1.0
C A:CYS84 5.0 9.9 1.0
CD2 A:LEU12 5.0 13.5 1.0

Reference:

T.Inoue, H.Sugawara, S.Hamanaka, H.Tsukui, E.Suzuki, T.Kohzuma, Y.Kai. Crystal Structure Determinations of Oxidized and Reduced Plastocyanin From the Cyanobacterium Synechococcus Sp. Pcc 7942. Biochemistry V. 38 6063 1999.
ISSN: ISSN 0006-2960
PubMed: 10320332
DOI: 10.1021/BI9824442
Page generated: Sun Dec 13 10:58:13 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy