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Copper in PDB 1aqs: Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures

Copper Binding Sites:

The binding sites of Copper atom in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures (pdb code 1aqs). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 7 binding sites of Copper where determined in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures, PDB code: 1aqs:
Jump to Copper binding site number: 1; 2; 3; 4; 5; 6; 7;

Copper binding site 1 out of 7 in 1aqs

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Copper binding site 1 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu54

b:0.0
occ:1.00
HB2 A:CYS7 1.7 0.0 1.0
CB A:CYS7 2.2 0.0 1.0
CU A:CU160 2.2 0.0 1.0
SG A:CYS9 2.3 0.0 1.0
SG A:CYS7 2.4 0.0 1.0
SG A:CYS24 2.5 0.0 1.0
HA A:CYS7 2.5 0.0 1.0
HB2 A:CYS24 2.7 0.0 1.0
CU A:CU157 2.7 0.0 1.0
CA A:CYS7 2.8 0.0 1.0
CB A:CYS24 2.9 0.0 1.0
HB3 A:CYS24 2.9 0.0 1.0
HB3 A:CYS7 3.2 0.0 1.0
HB2 A:CYS9 3.2 0.0 1.0
H A:CYS9 3.3 0.0 1.0
CU A:CU156 3.3 0.0 1.0
CB A:CYS9 3.4 0.0 1.0
SG A:CYS38 3.7 0.0 1.0
C A:CYS7 3.7 0.0 1.0
HB2 A:CYS26 3.7 0.0 1.0
N A:CYS7 4.0 0.0 1.0
HB3 A:CYS9 4.1 0.0 1.0
N A:CYS9 4.1 0.0 1.0
SG A:CYS14 4.1 0.0 1.0
O A:CYS7 4.2 0.0 1.0
SG A:CYS26 4.3 0.0 1.0
HA A:GLN21 4.4 0.0 1.0
N A:GLN8 4.4 0.0 1.0
O A:CYS20 4.4 0.0 1.0
H A:GLN8 4.4 0.0 1.0
H A:CYS7 4.4 0.0 1.0
CA A:CYS24 4.4 0.0 1.0
HB3 A:CYS30 4.4 0.0 1.0
CA A:CYS9 4.4 0.0 1.0
CB A:CYS26 4.5 0.0 1.0
CU A:CU159 4.6 0.0 1.0
H A:CYS26 4.6 0.0 1.0
HE1 A:HIS5 4.6 0.0 1.0
H A:CYS24 4.7 0.0 1.0
SG A:CYS30 4.9 0.0 1.0
HB3 A:CYS14 4.9 0.0 1.0
HA A:CYS9 4.9 0.0 1.0
C A:GLU6 4.9 0.0 1.0
HA A:CYS24 4.9 0.0 1.0
O A:GLU6 5.0 0.0 1.0
CU A:CU155 5.0 0.0 1.0

Copper binding site 2 out of 7 in 1aqs

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Copper binding site 2 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu55

b:0.0
occ:1.00
SG A:CYS14 2.3 0.0 1.0
SG A:CYS36 2.3 0.0 1.0
SG A:CYS11 2.5 0.0 1.0
HB3 A:CYS9 2.5 0.0 1.0
CU A:CU158 2.5 0.0 1.0
HB2 A:CYS11 2.6 0.0 1.0
CB A:CYS11 3.0 0.0 1.0
CU A:CU160 3.1 0.0 1.0
HB2 A:CYS14 3.1 0.0 1.0
CU A:CU159 3.2 0.0 1.0
CB A:CYS14 3.3 0.0 1.0
CB A:CYS9 3.3 0.0 1.0
HB2 A:CYS38 3.4 0.0 1.0
HB3 A:CYS11 3.4 0.0 1.0
HB2 A:CYS36 3.5 0.0 1.0
CB A:CYS36 3.5 0.0 1.0
SG A:CYS9 3.7 0.0 1.0
H A:CYS11 3.7 0.0 1.0
HB2 A:CYS9 3.8 0.0 1.0
SG A:CYS30 3.9 0.0 1.0
HB3 A:CYS14 3.9 0.0 1.0
HB3 A:CYS36 3.9 0.0 1.0
CB A:CYS38 4.3 0.0 1.0
CA A:CYS11 4.4 0.0 1.0
N A:CYS11 4.4 0.0 1.0
SG A:CYS38 4.4 0.0 1.0
H A:CYS14 4.4 0.0 1.0
CA A:CYS9 4.5 0.0 1.0
CA A:CYS14 4.5 0.0 1.0
HA A:CYS9 4.5 0.0 1.0
N A:CYS14 4.5 0.0 1.0
HB3 A:CYS38 4.7 0.0 1.0
HA A:CYS14 4.7 0.0 1.0
H A:SER13 4.8 0.0 1.0
H A:CYS38 4.8 0.0 1.0
CA A:CYS36 4.8 0.0 1.0
HB3 A:SER13 4.9 0.0 1.0
HA A:CYS11 5.0 0.0 1.0
H A:GLY12 5.0 0.0 1.0
C A:CYS9 5.0 0.0 1.0
CU A:CU154 5.0 0.0 1.0

Copper binding site 3 out of 7 in 1aqs

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Copper binding site 3 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu56

b:0.0
occ:1.00
SG A:CYS20 2.3 0.0 1.0
SG A:CYS7 2.4 0.0 1.0
HB2 A:CYS24 2.8 0.0 1.0
O A:CYS20 2.9 0.0 1.0
SG A:CYS38 3.1 0.0 1.0
CU A:CU160 3.1 0.0 1.0
HB3 A:CYS24 3.2 0.0 1.0
C A:CYS20 3.2 0.0 1.0
HB2 A:CYS20 3.3 0.0 1.0
HB2 A:CYS7 3.3 0.0 1.0
HA A:GLN21 3.3 0.0 1.0
CU A:CU154 3.3 0.0 1.0
CB A:CYS20 3.3 0.0 1.0
CB A:CYS7 3.3 0.0 1.0
HB3 A:CYS7 3.5 0.0 1.0
CB A:CYS24 3.5 0.0 1.0
HA A:CYS14 3.6 0.0 1.0
SG A:CYS14 3.6 0.0 1.0
N A:GLN21 3.7 0.0 1.0
HB2 A:CYS9 3.9 0.0 1.0
CA A:CYS20 3.9 0.0 1.0
CA A:GLN21 4.0 0.0 1.0
CU A:CU157 4.2 0.0 1.0
HB3 A:CYS14 4.2 0.0 1.0
HB3 A:CYS20 4.2 0.0 1.0
CB A:CYS14 4.3 0.0 1.0
CA A:CYS14 4.3 0.0 1.0
H A:GLN21 4.4 0.0 1.0
O A:ASN17 4.4 0.0 1.0
H A:CYS20 4.4 0.0 1.0
HA A:CYS24 4.4 0.0 1.0
HB3 A:GLN21 4.6 0.0 1.0
CA A:CYS24 4.6 0.0 1.0
N A:CYS20 4.6 0.0 1.0
SG A:CYS24 4.7 0.0 1.0
H A:GLY39 4.7 0.0 1.0
CB A:CYS9 4.7 0.0 1.0
O A:CYS14 4.7 0.0 1.0
HA A:CYS20 4.7 0.0 1.0
SG A:CYS9 4.7 0.0 1.0
CA A:CYS7 4.8 0.0 1.0
CB A:CYS38 4.8 0.0 1.0
CB A:GLN21 4.9 0.0 1.0
HB3 A:ASN17 4.9 0.0 1.0
O A:CYS7 5.0 0.0 1.0

Copper binding site 4 out of 7 in 1aqs

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Copper binding site 4 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu57

b:0.0
occ:1.00
HB2 A:CYS24 2.1 0.0 1.0
SG A:CYS26 2.2 0.0 1.0
SG A:CYS38 2.3 0.0 1.0
HA A:CYS38 2.4 0.0 1.0
SG A:CYS24 2.5 0.0 1.0
CU A:CU160 2.5 0.0 1.0
CB A:CYS24 2.6 0.0 1.0
CU A:CU154 2.7 0.0 1.0
H A:SER25 2.8 0.0 1.0
H A:CYS26 3.1 0.0 1.0
HB2 A:CYS26 3.1 0.0 1.0
CB A:CYS38 3.2 0.0 1.0
CA A:CYS38 3.2 0.0 1.0
N A:SER25 3.3 0.0 1.0
CU A:CU159 3.3 0.0 1.0
CB A:CYS26 3.3 0.0 1.0
HB2 A:CYS38 3.5 0.0 1.0
CA A:CYS24 3.5 0.0 1.0
HB3 A:CYS24 3.5 0.0 1.0
N A:CYS26 3.5 0.0 1.0
HB2 A:CYS7 3.6 0.0 1.0
C A:CYS24 3.7 0.0 1.0
H A:GLY39 3.7 0.0 1.0
HA A:CYS24 3.8 0.0 1.0
SG A:CYS9 3.9 0.0 1.0
C A:SER25 4.1 0.0 1.0
CA A:CYS26 4.1 0.0 1.0
HB3 A:CYS26 4.1 0.0 1.0
CU A:CU156 4.2 0.0 1.0
HB3 A:CYS38 4.2 0.0 1.0
N A:CYS38 4.2 0.0 1.0
HE1 A:HIS5 4.2 0.0 1.0
C A:CYS38 4.3 0.0 1.0
CA A:SER25 4.3 0.0 1.0
N A:GLY39 4.3 0.0 1.0
CB A:CYS7 4.5 0.0 1.0
SG A:CYS30 4.6 0.0 1.0
SG A:CYS14 4.6 0.0 1.0
H A:CYS38 4.7 0.0 1.0
O A:CYS24 4.7 0.0 1.0
SG A:CYS7 4.7 0.0 1.0
HB2 A:SER25 4.7 0.0 1.0
HA A:CYS26 4.7 0.0 1.0
N A:CYS24 4.8 0.0 1.0
HA A:CYS7 4.8 0.0 1.0
O A:PRO37 4.9 0.0 1.0
C A:PRO37 4.9 0.0 1.0
H A:CYS24 4.9 0.0 1.0
O A:SER25 4.9 0.0 1.0

Copper binding site 5 out of 7 in 1aqs

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Copper binding site 5 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 5 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu58

b:0.0
occ:1.00
SG A:CYS30 2.2 0.0 1.0
SG A:CYS11 2.4 0.0 1.0
CU A:CU155 2.5 0.0 1.0
HB3 A:CYS9 2.7 0.0 1.0
O A:CYS30 2.8 0.0 1.0
SG A:CYS9 3.0 0.0 1.0
HA A:CYS9 3.1 0.0 1.0
HB2 A:CYS36 3.2 0.0 1.0
CB A:CYS9 3.2 0.0 1.0
CU A:CU159 3.3 0.0 1.0
CB A:CYS30 3.3 0.0 1.0
C A:CYS30 3.4 0.0 1.0
SG A:CYS36 3.4 0.0 1.0
HB3 A:CYS30 3.4 0.0 1.0
HA A:CYS30 3.6 0.0 1.0
CA A:CYS30 3.6 0.0 1.0
CA A:CYS9 3.7 0.0 1.0
CB A:CYS36 3.8 0.0 1.0
H A:CYS11 3.8 0.0 1.0
H A:GLN10 4.0 0.0 1.0
H A:SER32 4.0 0.0 1.0
CU A:CU160 4.0 0.0 1.0
CB A:CYS11 4.1 0.0 1.0
HB2 A:CYS9 4.2 0.0 1.0
SG A:CYS14 4.2 0.0 1.0
HB2 A:CYS11 4.2 0.0 1.0
HB2 A:CYS30 4.3 0.0 1.0
O A:SER32 4.3 0.0 1.0
N A:ASN31 4.4 0.0 1.0
HB3 A:CYS36 4.5 0.0 1.0
C A:CYS9 4.6 0.0 1.0
N A:GLN10 4.6 0.0 1.0
HA A:CYS36 4.6 0.0 1.0
N A:SER32 4.6 0.0 1.0
N A:CYS11 4.6 0.0 1.0
HB3 A:CYS11 4.7 0.0 1.0
HA A:ASN31 4.7 0.0 1.0
HB2 A:CYS14 4.7 0.0 1.0
N A:CYS9 4.8 0.0 1.0
CA A:CYS36 4.9 0.0 1.0
HA A:ASP33 4.9 0.0 1.0
C A:SER32 4.9 0.0 1.0
HB3 A:CYS26 4.9 0.0 1.0
H A:CYS9 4.9 0.0 1.0
CB A:CYS14 5.0 0.0 1.0
CA A:ASN31 5.0 0.0 1.0

Copper binding site 6 out of 7 in 1aqs

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Copper binding site 6 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 6 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu59

b:0.0
occ:1.00
SG A:CYS26 2.2 0.0 1.0
SG A:CYS36 2.2 0.0 1.0
SG A:CYS30 2.3 0.0 1.0
HB2 A:CYS38 2.7 0.0 1.0
CU A:CU155 3.2 0.0 1.0
CU A:CU160 3.2 0.0 1.0
HD2 A:PRO37 3.2 0.0 1.0
HA A:CYS36 3.2 0.0 1.0
H A:CYS38 3.3 0.0 1.0
HB3 A:CYS26 3.3 0.0 1.0
CU A:CU158 3.3 0.0 1.0
CU A:CU157 3.3 0.0 1.0
CB A:CYS36 3.3 0.0 1.0
CB A:CYS26 3.4 0.0 1.0
HA A:CYS38 3.4 0.0 1.0
N A:CYS38 3.4 0.0 1.0
CB A:CYS38 3.5 0.0 1.0
HB2 A:CYS36 3.5 0.0 1.0
CA A:CYS36 3.5 0.0 1.0
C A:CYS36 3.6 0.0 1.0
CA A:CYS38 3.7 0.0 1.0
HB2 A:CYS26 3.7 0.0 1.0
N A:PRO37 3.8 0.0 1.0
SG A:CYS9 3.9 0.0 1.0
CB A:CYS30 3.9 0.0 1.0
SG A:CYS38 3.9 0.0 1.0
CD A:PRO37 4.0 0.0 1.0
C A:PRO37 4.1 0.0 1.0
O A:CYS36 4.2 0.0 1.0
HB2 A:CYS30 4.2 0.0 1.0
HB3 A:CYS30 4.3 0.0 1.0
HB3 A:CYS36 4.3 0.0 1.0
SG A:CYS14 4.4 0.0 1.0
HB3 A:CYS38 4.4 0.0 1.0
HD3 A:PRO37 4.5 0.0 1.0
CU A:CU154 4.6 0.0 1.0
CA A:PRO37 4.6 0.0 1.0
HB3 A:CYS9 4.6 0.0 1.0
CA A:CYS26 4.7 0.0 1.0
O A:PRO37 4.7 0.0 1.0
HA A:CYS26 4.8 0.0 1.0
HA A:CYS30 4.9 0.0 1.0
SG A:CYS11 4.9 0.0 1.0
CB A:CYS9 4.9 0.0 1.0
CA A:CYS30 5.0 0.0 1.0

Copper binding site 7 out of 7 in 1aqs

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Copper binding site 7 out of 7 in the Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 7 of Cu-Metallothionein From Saccharomyces Cerevisiae, uc(Nmr), 10 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu60

b:0.0
occ:1.00
CU A:CU154 2.2 0.0 1.0
SG A:CYS38 2.3 0.0 1.0
SG A:CYS14 2.3 0.0 1.0
SG A:CYS9 2.5 0.0 1.0
CU A:CU157 2.5 0.0 1.0
HB2 A:CYS9 3.0 0.0 1.0
CB A:CYS9 3.1 0.0 1.0
CU A:CU155 3.1 0.0 1.0
CU A:CU156 3.1 0.0 1.0
HB3 A:CYS9 3.1 0.0 1.0
HB2 A:CYS38 3.1 0.0 1.0
HB2 A:CYS24 3.1 0.0 1.0
CU A:CU159 3.2 0.0 1.0
SG A:CYS7 3.3 0.0 1.0
CB A:CYS38 3.3 0.0 1.0
HB2 A:CYS7 3.7 0.0 1.0
SG A:CYS26 3.8 0.0 1.0
CB A:CYS14 3.8 0.0 1.0
CB A:CYS24 3.9 0.0 1.0
HB3 A:CYS14 3.9 0.0 1.0
SG A:CYS24 4.0 0.0 1.0
CU A:CU158 4.0 0.0 1.0
HA A:CYS38 4.0 0.0 1.0
SG A:CYS36 4.1 0.0 1.0
HB3 A:CYS38 4.1 0.0 1.0
CB A:CYS7 4.1 0.0 1.0
SG A:CYS30 4.3 0.0 1.0
HB3 A:CYS24 4.3 0.0 1.0
CA A:CYS38 4.3 0.0 1.0
H A:CYS9 4.4 0.0 1.0
HA A:CYS14 4.4 0.0 1.0
HB2 A:CYS26 4.4 0.0 1.0
HB2 A:CYS14 4.5 0.0 1.0
CA A:CYS9 4.5 0.0 1.0
HA A:CYS7 4.7 0.0 1.0
H A:GLY39 4.7 0.0 1.0
CA A:CYS14 4.7 0.0 1.0
CB A:CYS26 4.8 0.0 1.0
N A:CYS9 4.9 0.0 1.0
HA A:CYS9 4.9 0.0 1.0
HB3 A:CYS7 4.9 0.0 1.0
HB3 A:CYS30 4.9 0.0 1.0
CA A:CYS7 4.9 0.0 1.0

Reference:

C.W.Peterson, S.S.Narula, I.M.Armitage. 3D Solution Structure of Copper and Silver-Substituted Yeast Metallothioneins. Febs Lett. V. 379 85 1996.
ISSN: ISSN 0014-5793
PubMed: 8566237
DOI: 10.1016/0014-5793(95)01492-6
Page generated: Wed Sep 2 21:33:35 2020
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