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Copper in PDB 9gce: Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound

Protein crystallography data

The structure of Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound, PDB code: 9gce was solved by J.P.L.Franco Cairo, T.L.R.Correa, W.A.Offen, A.Nairn, J.Walton, G.J.Davies, P.H.Walton, S.T.Sweeney, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.68 / 2.25
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 79.593, 79.593, 63.453, 90, 90, 120
R / Rfree (%) 21.6 / 25.5

Other elements in 9gce:

The structure of Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound (pdb code 9gce). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound, PDB code: 9gce:

Copper binding site 1 out of 1 in 9gce

Go back to Copper Binding Sites List in 9gce
Copper binding site 1 out of 1 in the Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Ang-1 Domain of the Hupe/Urej-2 Protein From Rhodobacteraceae Bacterium Rbang-1A with Cu Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu204

b:82.7
occ:1.00
ND1 A:HIS1 2.0 70.8 1.0
N A:HIS1 2.1 68.9 1.0
HD21 A:ASN41 2.6 81.0 1.0
OD1 A:ASN41 2.7 87.5 1.0
CE1 A:HIS1 3.0 66.0 1.0
CG A:HIS1 3.0 62.8 1.0
CA A:HIS1 3.1 59.3 1.0
ND2 A:ASN41 3.1 80.0 1.0
HG22 A:THR40 3.2 53.8 1.0
CG A:ASN41 3.2 86.9 1.0
HE1 A:HIS1 3.2 69.1 1.0
HA A:HIS1 3.3 59.8 1.0
O A:HOH320 3.3 65.3 1.0
CB A:HIS1 3.3 54.2 1.0
HB2 A:HIS1 3.5 57.1 1.0
OD1 A:ASP50 3.7 101.0 1.0
CG2 A:THR40 3.8 51.6 1.0
HG21 A:THR40 3.8 52.7 1.0
HG23 A:THR40 3.8 51.8 1.0
OD2 A:ASP50 3.9 94.9 1.0
HD22 A:ASN41 3.9 82.1 1.0
NE2 A:HIS1 4.0 69.5 1.0
CD2 A:HIS1 4.0 68.0 1.0
H A:ASN41 4.1 66.2 1.0
CG A:ASP50 4.3 97.8 1.0
HB3 A:HIS1 4.3 56.0 1.0
OD1 A:ASP39 4.3 60.1 1.0
C A:HIS1 4.4 58.5 1.0
CB A:ASN41 4.5 85.0 1.0
N A:ASN41 4.6 66.7 1.0
O A:HIS1 4.8 72.1 1.0
HA A:ASN41 4.9 76.8 1.0
HD2 A:HIS1 4.9 65.7 1.0
HB2 A:ASN41 4.9 83.2 1.0
CA A:ASN41 5.0 76.5 1.0

Reference:

J.P.L.Franco Cairo, T.L.R.Correa, W.A.Offen, A.Nairn, J.Walton, G.J.Davies, P.H.Walton, S.T.Sweeney. Signal-Strapping As A Protein-Sequence Search Method For the Discovery of Metalloproteins To Be Published.
Page generated: Sat Dec 13 15:17:52 2025

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