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Copper in PDB 6ibj: Copper Binding Protein From Laetisaria Arvalis (LAX325)

Protein crystallography data

The structure of Copper Binding Protein From Laetisaria Arvalis (LAX325), PDB code: 6ibj was solved by K.E.H.Frandsen, T.Tandrup, A.Labourel, M.Haon, J.-G.Berrin, L.Lo Leggio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.88 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.920, 74.920, 64.390, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 25.6

Copper Binding Sites:

The binding sites of Copper atom in the Copper Binding Protein From Laetisaria Arvalis (LAX325) (pdb code 6ibj). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Copper Binding Protein From Laetisaria Arvalis (LAX325), PDB code: 6ibj:

Copper binding site 1 out of 1 in 6ibj

Go back to Copper Binding Sites List in 6ibj
Copper binding site 1 out of 1 in the Copper Binding Protein From Laetisaria Arvalis (LAX325)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Copper Binding Protein From Laetisaria Arvalis (LAX325) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu203

b:56.3
occ:1.00
OD2 A:ASP122 2.0 57.4 1.0
N A:HIS1 2.0 61.3 1.0
NE2 A:HIS49 2.0 57.9 1.0
ND1 A:HIS1 2.0 60.4 1.0
CG A:ASP122 2.8 54.1 1.0
CE1 A:HIS49 3.0 59.1 1.0
OD1 A:ASP122 3.0 54.1 1.0
CE1 A:HIS1 3.0 57.7 1.0
CG A:HIS1 3.1 52.1 1.0
CD2 A:HIS49 3.1 57.2 1.0
CA A:HIS1 3.1 56.8 1.0
CB A:HIS1 3.4 51.8 1.0
O A:HOH344 4.1 62.7 1.0
ND1 A:HIS49 4.1 51.7 1.0
NE2 A:HIS1 4.2 52.6 1.0
CD2 A:HIS1 4.2 51.8 1.0
CG A:HIS49 4.2 57.4 1.0
CB A:ASP122 4.3 53.0 1.0
OH A:TYR118 4.4 47.0 1.0
C A:HIS1 4.5 53.9 1.0
CD1 A:LEU125 4.5 42.2 1.0
O A:HIS1 4.7 47.7 1.0
CE1 A:TYR118 4.8 43.1 1.0
O A:HOH302 4.9 46.6 1.0

Reference:

K.E.H.Frandsen, T.Tandrup, A.Labourel, M.Haon, J.-G.Berrin, L.Lo Leggio. Auxiliary Activity Cazyme To Be Published.
Page generated: Sun Dec 13 11:23:03 2020

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