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Copper in the structure of Cu/Zn Superoxide Dismutase From Brucella Abortus (pdb 2aqm)

The binding sites of Copper atom in the structure of Cu/Zn Superoxide Dismutase From Brucella Abortus (pdb code 2aqm). This binding sites where shown with 5.0 Angstroms radius around Copper atom.
The 2aqm structure was solved by M.DIDONATO, C.J.KASSMANN, C.K.BRUNS, D.E.CABELLI, Z.CAO, L.B.TABATABAI, J.S.KROLL, E.D.GETZOFF, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)30.0-1.1
Space groupI222
a (A)49.910
b (A)70.528
c (A)80.359
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)11.4
Rfree (%)13.8

Copper Binding Sites:

Copper binding site 1 out of 1 in 2aqm


Copper binding site 1 out of 1 in 2aqm
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stereopicture of Copper binding site 1 out of 1 in 2aqm
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 2aqm. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His48, A: His50, A: His73, A: Met126, A: His128, A: Hoh329, A: Hoh395, A: Hoh600, A: Hoh601,

conact list:


AtomAtomDistance (A)
CuNE2 A:His484.06
CuN A:His484.71
CuCB A:His483.48
CuND1 A:His481.99
CuCD2 A:His484.14
CuCE1 A:His482.92
CuCG A:His483.06
CuCA A:His484.62
CuNE2 A:His502.03
CuND1 A:His504.07
CuCD2 A:His503.15
CuCE1 A:His502.90
CuCG A:His504.22
CuNE2 A:His732.44
CuND1 A:His734.47
CuCD2 A:His733.20
CuCE1 A:His733.43
CuCG A:His734.36
CuCB A:Met1264.17
CuCG A:Met1264.27
CuNE2 A:His1282.08
CuND1 A:His1284.15
CuCD2 A:His1283.09
CuCE1 A:His1283.02
CuCG A:His1284.20
CuO A:Hoh3293.89
CuO A:Hoh3954.47
CuO A:Hoh6003.55
CuO A:Hoh6012.37

interactive model:




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